Publications

Publications

Hause, C.L., G.P. Singer, R.A. Buchanan, D.E. Cocherell, N.A. Fangue, A.L. Rypel. 2023. Survival of a threatened salmon is linked to spatial variability in river conditions. Canadian Journal of Fisheries and Aquatic Sciences, in press.

 

Yanagitsuru, Y.R., I.Y. Daza, L.S. Lewis, J.A. Hobbs, T. Hung, R.E. Connon, N.A. Fangue. 2022. Growth, Osmoregulation, and Ionoregulation of Longfin Smelt (Spirinchus thaleichthys) Yolk-sac Larvae at Different Salinities. Conservation Physiology, in press.

 

Burman, S.G., J. Gao, G.B. Pasternack, N.A. Fangue, P. Cadrett, E. Campbell, D. Ghosal. 2021. TempMesh – A Flexible Wireless Sensor Network for Monitoring River-Temperatures. ACM Transactions on Sensor Networks 2021.

Yanagitsuru, Y.R., B.E. Davis, M.R. Baerwald, T.R. Sommer, N.A. Fangue. 2022. Using Physiology to Recover Imperiled Smelt Species. Nann A Fangue, Steven J. Cooke, Anthony P. Farrell, Colin J. Brauner and Erika J. Eliason (Eds). Fish Physiology: Conservation Physiology, Vol 39B, Elsevier, in press.

 

Thomas, M.J.,  A.L. Rypel, G.P. Singer, A.P. Klimley, M.D. Pagel, E.D. Chapman, N.A. Fangue. 2022. Movement patterns of juvenile green sturgeon (Acipenser medirostris) in the San Francisco Bay Estuary. Environmental Biology of Fishes, in press.

 

Oldach, E., H. Killeen, P. Shukla, E. Brauer, N. Carter, J. Fields, A. Thomsen,  C. Cooper, L. Mellinger, K. Wang, C. Hendrickson, A. Neumann, P. Sporon Bøving, N.A. Fangue. 2022. Managed and unmanaged whale mortality in the California Current Ecosystem. Marine Policy, in press.

 

Cooke, S.J., K.R. Hultine, J.L. Rummer, N.A. Fangue, F. Seebacher, E.J. Eliason, H.A. MacMillan, A. Fuller and C.E. Franklin.  2022.  Elevating the impact of conservation physiology by building a community devoted to excellence, transparency, ethics, integrity and mutual respect.  Conservation Physiology. 00:000-000.

 

Holleman, R.C., E.S. Gross, M.J. Thomas, A.L. Rypel and N.A. Fangue. 2022. Swimming behavior of emigrating Chinook salmon smolts. PLOS ONE, in press.

 

McInturf, A.G., B. Muhling, J.J. Bizzarro, N.A. Fangue, D. Caillaud and H. Dewar. 2022. Spatial distribution, temporal changes, and knowledge gaps in basking shark (Cetorhinus maximus) sightings in the California Current Ecosystem. Frontiers in Marine Science. in press

 

Barros, A., J.A. Hobbs, M. Willmes, C. M. Parker, M. Bisson, N. A. Fangue, A. L. Rypel and L. S. Lewis. 2022. Spatial Heterogeneity in Prey Availability, Feeding Success, and Dietary Selectivity for the Threatened Longfin Smelt. Estuaries and Coasts. https://doi.org/10.1007/s12237-021-01024-y

 

Karim, C., L. Lin, J. P. Van Eenennaam, N. A. Fangue, A. D. Schreier, M. A. Phillips and R. H. Rice. 2022. Epidermal cell cultures from white and green sturgeon (Acipenser transmontanus and medirostris): expression of TGM1-like transglutaminases and CYP4501A. PlosOne, in press.

 

Mauduit, F.A., A. Segarra, M. Mandic, A.E. Todgham, M.R. Baerwald, A.D. Schreier, N.A. Fangue, R.E. Connon.  Impact of pathogen exposure on juvenile Chinook salmon health and physiological performance. Conservation Physiology, in press.

 

Gross, E.S., R. C. Holleman, M. J. Thomas, N.A. Fangue and A. R. Rypel. 2021. Development and evaluation of a Chinook salmon smolt swimming behavior model. Water, in press.

 

Bell-Tilcock, M., C.A. Jeffries, A.L. Rypel, P.B. Moyle, N.A. Fangue, J.V.E. Katz, T.R. Sommer, J.Louise Conrad, and R.C. Johnson.  Biogeochemical processes create distinct isotopic fingerprints to track floodplain rearing of juvenile salmon. PLOS One, in press.

 

Lewis, L., C. Denney, M. Willmes, W. Xieu, R.A. Fichman, F. Zhao, B. Hammock, A. Schultz, N.A. Fangue, and J. Hobbs.  2021.  Otolith-based approaches indicate strong effects of environmental variation on the growth of a critically endangered estuarine fish.  Marine Ecological Progress Series, in press.

 

Naslund, A.W., B.E. Davis, J.A. Hobbs, N.A. Fangue, and A.E. Todgham. 2021 Warming, not CO2-acidification, alters otolith development of juvenile Antarctic rockcod. Polar Biology, in press.

 

Rypel, A.L., P. Saffarinia, C.C. Vaughn, L. Nesper, K. O’Reilly, C.A. Parisek, M.L. Miller, P.B. Moyle, N.A. Fangue, M. Bell-Tilcock, D. Ayers, S.R. David.  2021.  Goodbye to “rough fish”: paradigm shift in the conservation of native fishes. Fisheries,  https://doi.org/10.1002/fsh.10660.

 

Fangue, N.A., D.E. Cocherell, F. Mauduit, J.B. Poletto, K. Carr, T.A. O’Rear, G. Soyster, S. Lorenzato, J. Carlon, M.L. Kavvas and J.J. Cech, Jr.  2021. Juvenile Chinook Salmon Use of Sandbar Willows in a Large-scale, Simulated Riparian Floodplain: Microhabitat and Energetics.  Environmental Biology of Fishes 104, 867-879, http://doi.org/10.1007/s10641-021-01119-2.

 

Del Rio, A.M., G.N. Mukai, B.T. Martin, R.C. Johnson, N.A. Fangue, J.A. Israel, and A.E. Todgham.  2021.  Differential sensitivity to warming and hypoxia during developemtn and long-term effects of developmental exposure in early life stage Chinook salmon.  Conservation Physiology, https://doi.org/10.1093/conphys/coab054.

 

Aliperti, J., B.E. Davis, N.A. Fangue, A.E. Todgham, and D.H. Van Vuren.  2021.  Bridging animal personality with space- and resource use in a free-ranging population of an asocial ground squirrel.  Animal Behavior, in press.

Zillig, K.W., R.A. Lusardi, P.B. Moyle and N.A. Fangue. 2021. One size does not fit all: variation in thermal eco-physiology among Pacific Salmonids. Rev. Fish. Biol. Fisheries. https://doi.org/10.1007/s11160-020-09632-w

 

Aha, N.M., P.B. Moyle, N.A. Fangue, A.L. Rypel and J.R. Durand. 2021. Managed wetlands can benefit juvenile Chinook salmon in a tidal marsh. Estuaries and Coasts. https://doi.org/10.1007/s12237-020-00880-4

 

Yanagitsuru, Y., M. Main, L. Lewis, J. Hobbs, T.C. Hung, R. Connon and N. Fangue. 2021. Effects of temperature and growth performance of embryos and yolksac larvae of a threatened estuarine fish: longfin smelt (Spirinchus thaleichthys). Aquaculture. In press

 

Cooke, S.J., J.N. Bergman, C.L. Madliger, R.L. Cramp, J. Beardall, G.P. Burness, T.D. Clark, B. Dantzer, E. de la Barrera, N.A. Fangue, C.E. Franklin, A. Fuller, L.A. Hawkes, K.R. Hultine, K.E. Hunt, O.P. Love, H.A. MacMillan, J.W. Mandelman, F.C. Mark, L.B. Martin, A.E.M. Newman, A.B. Nicotra, G.D. Raby, S.A. Robinson, Y. Ropert-Coudert, J.L. Rummer, F. Seebacher, A.E. Todgham, S. Tomlinson, and S.L. Chown.  2021.  One hundred research questions in conservation physiology for generating actionable evidence to inform conservation policy and practice.  Conservation Physiology.  00:000-000.

 

Komoroske, L.M., K.M. Jeffries, A. Whitehead, J. Roach, M. Britton, R. Connon, C. Verhille, S.M. Brander, and N.A. Fangue.   Transcriptional flexibility during thermal challenge corresponds with expanded thermal tolerance in an invasive compared to native fish.  Evolutionary Applications, In press.

 

Mundy, P., K.H. Hartz, C. Fulton, M. Lydy, S. Brander, T. Hung, N. Fangue, and R.E. Connon.  2020.  Exposure to permethrin or chlorpyrifos causes differential does- and time-dependent behavioral effects at early larval stages of an endangered teleost species.  Endangered Species Research, in press.  

 

Verhille, C.E., T.F. Dabruzzi, D.E. Cocherell, B. Mahardja, F. Feyrer, T.C. Foin, M.R. Baerwald, and N.A. Fangue.  2020. Inter-population differences in salinity tolerance of adult wild Sacramento Splittail: osmoregulatory and metabolic responses to salinity.  Conservation Physiology, in press.

 

Sweeney, J.K., M. Willmes, K. Sellheim, L.S. Lewis, J.A. Hobbs, N.A. Fangue, and J.E. Merz.  2020.  Calcification and element incorporation in age-0 White Sturgeon fin rays with implications for the reconstruction of habitat use.  Environmental Biology of Fishes, In press.

 

Willmes, M., E.E. Jacinto, L.S. Lewis, R. A. Fichman, Z. Bess, G. Singer, A. Steel, P.B. Moyle, A.L. Rypel, N.A. Fangue, J.G. Glessner, J.A. Hobbs, E.D. Chapman.  2020.  Geochemical tools identify the origins of Chinook Salmon returning to a restored creek. Fisheries: doi:10.1002/fsh.10516

 

Mundy, P.C., M.F. Carte, S.M Brander, T. Hung, N.A. Fangue, and R.E. Connon.  2020.  Bifenthrin exposure causes hyperactivity in early larval stages of an endangered fish species at concentrations that occur during their hatching season.  Aquatic Toxicology, in press.

 

Fangue, N.A., A.E. Todgham, and P.M. Schulte.  2020. Chapter 7: Thermal Biology, In:The Physiology of Fishes, 5th edition, Taylor and Francis, eds. Suzanne Currie and David Evans.

 

Lehman, B., R. Johnson, S. Foott, N.A. Som, O. Burgess, M. Adkison, K. Miller, S. Hallet, M. Purcell, B. Martínez-López, P. Valdes-Donoso, R. Connon, N.A. Fangue, and A. L. Collins.  2020.  Disease in Central Valley Salmon: Status and Lessons from Other Systems.  San Francisco Estuary and Watershed Science, in press.

 

Singer, G.P., E.D. Chapman, A. Ammann, A.P. Klimley, N.A. Fangue and A.L. Rypel.  2020.  Historic drought influences outmigration dynamics of juvenile fall- and spring-run Chinook salmon.  Environmental Biology of Fishes, in press.

 

Cooke, S.J., C.L. Madliger, R.L. Cramp, J. Beardall, G.P. Burness, S.L. Chown, T.D. Clark, B. Dantzer, E. de la Barrera, N.A. Fangue, C.E. Franklin, A. Fuller, L.A. Hawkes, K.R. Hultine, K.E. Hunt, O.P. Love, H.A. MacMillan, J.W. Mandelman, F.C. Mark, L.B. Martin, A.E.M. Newman, A.B. Nicotra, S.A. Robinson, Y. Ropert-Coudert, J.L. Rummer, F. Seebacher and A.E. Todgham.  In Press.  Reframing conservation physiology to be more inclusive, integrative, relevant and forward-looking: reflections and a horizon scan.  Conservation Physiology. 00.

 

Hansen, M.J. , Ligocki, I.Y., Zillig, K.E., Steel, A.E., Todgham, A.E., and Fangue, N.A..  2020.  Risk-taking and locomotion in foraging threespine sticklebacks (Gasterosteus aculeatus): the effect of nutritional stress is dependent on social context.  Behavioral Ecology and Sociobiology 74:12, doi:10.1007/s00265-019-2795-4.

 

Baird, S., A. Steel, D. Cocherell, J. Poletto, R. Follenfant, and N.A. Fangue.  2019.  Experimental assessment of predation risk for juvenile green sturgeon, Acipenser medirostris, by two predatory fishes.  Journal of Applied Ichthyology, 36:14-24.

 

Mundy, P., K.M. Jeffries, N.A. Fangue, R.E. Connon.  2019.  Differential regulation of select osmoregulatory genes and Na+/K+-ATPase parlors may contribute to population differences in salinity tolerance in a semi-anadromous fish.  Comparative Biochemistry and Physiology, Part A., doi:10.1016/j.cbpa.2019.110584.

 

Davis, B.E., M.J. Hansen, D.E. Cocherell, T.X. Nguyen, T. Sommer, R.D. Baxter, N.A. Fangue, A.E. Todgham.  2019. Consequences of temperature and temperature variability on swimming activity, group structure, and predation of endangered Delta smelt.  Freshwater Biology, 64(12), 2156-2175.

 

Agha, M., Y.R. Yanagitsuru, N.A. Fangue, A.J. Nowakowski, L. Kojima, J.J. Cech Jr., M.K. Riley, J. Freeman, D.E. Cocherell, B.D. Todd.  2019. Physiological consequences of rising water salinity for a declining freshwater turtle.  Conservation Physiology, 7(1); coz054.

 

Hansen M.J., Steel A.E., Cocherell D.E., Patrick P.H., Sills M., Cooke S.J., Carr K.J., Kavvas M.L., Fangue N.A.  Experimental evaluation of the effect of a light emitting diode device on Chinook salmon smolt entrainment in a simulated river.  Hydrobiologia, DOI: 10.1007/s10750-019-04022-1HYDR-D-19-00134R2

 

McInturf, A.G., A.E. Steel, M. Buckhorn, P. Sandstrom, C.J. Slager, N.A. Fangue, A.P. Klimley, D. Caillaud.  2019.  Use of a hydrodynamic model to examine behavioral response of broadnose sevengill sharks (Notorynchus cepedianus) to estuarine tidal flow.  Environmental Biology of Fishes, 102(9), 1149-1159.

 

Romney, A.L.T., Y.R. Yanagitsuru, P.C. Mundy, N.A. Fangue, T. Hung, S.M. Brander, R.E. Connon. 2019. Developmental Staging and Salinity Tolerance in Embryos of the Delta Smelt, Hypomesus transpacificus.  Aquaculture, 511:634191.

 

Rodgers, E.M., J.B. Poletto, D.F. Gomez Isaza, J.P. Van Eenennaam, R.E. Connon, A.E. Todgham, A. Seesholtz, J.C. Heublein, J.J. Cech Jr., J.T. Kelly, and N.A. Fangue.  Integrating physiological data with the conservation and management of fishes: a meta-analytical review using the threatened green sturgeon (Acipenser medirostris). Conservation Physiology, 7(1), coz035.

 

Thomas, M.J., M.L. Peterson, E.D. Chapman, N.A. Fangue and A.P. Klimley.  2019.  Individual habitat use and behavior of acoutically-tagged juvenile green sturgeon in the Sacramento-San Joaquin Delta.  Environmental Biology of Fishes, 102(8):1025-1037.

 

Jeffries, K.M., R.E. Connon, C. Verhille, T. Dabruzzi, M. Britton, B. Durbin-Johnson and N.A. Fangue.  2019.  Divergent transcriptomic signatures in response to salinity exposure in two populations of an estuarine fish.  Evolutionary Applications, 12:1212-1226.

 

Dabruzzi, T.F., N.A. Fangue, N.N. Kadir, and W.A. Bennett.  2019.  Thermal niche adaptation of common mudskipper (Periophthalamus kalolo) and Barred mudskipper (Periophthalamus argentilineatus) in air and water.  Journal of Thermal Biology, 81:170-177.

 

Steel, A. E., M.J. Hansen, D.E. Cocherell, and N.A. Fangue. 2019.  Behavioral responses of juvenile white sturgeon (Acipenser transmontanus) to manipulations of nutritional state and predation risk.  Environmental Biology of Fishes, DOI: 10.1007/s10641-019-00873-8

 

Zarri, L.J., S.B. Mehl, E.P. Palkovacs, and N.A. Fangue.  2019. Key transitions in morphological development improve age estimates in white sturgeon Acipenser transmontanus.  Journal of Fish Biology, DOI: 10.1111/jfb.13954

 

Hamda, N.T., B. Martin, J.B. Poletto, D.E. Cocherell, N.A. Fangue, J. Van Eenennaam, E. A. Mora and  E. Danner.  2019.  Applying a simplified energy-budget model to explore the effects of temperature and food availability on the life history of green sturgeon (Acipenser medirostris).  Ecological Modeling, 395: 1-10

 

Singer, G.P., M.J. Hansen, K.V. Ho, K.W. Lee, D.E. Cocherell, A.P. Klimley, A.L. Rypel, and N.A. Fangue. 2019. Behavioral response of juvenile Chinook Salmon (Oncorhynchus tshawytscha) to surgical implantation of micro-acoustic transmitters.  Transactions of the American Fisheries Society, doi.org/10.1002/tafs.10147

 

Willmes, M., L.S. Lewis, B.E. Davis, L. Loiselle, H.F. James, C. Denny, R. Baxter, J. Louises Conrad, N.A. Fangue, T. Hung, R.A. Armstrong, I.S. Williams, P. Holden, and J.A. Hobbs.  2019.  Calibrating temperature reconstructions from fish otolith oxygen isotope analysis for California’s critically endangered Delta Smelt.  Rapid Commun Mass Spectrum.  33: 1207-1220.

 

Davis, B.E., D. E. Cocherell, T. Sommer, R.D. Baxter, A.E. Todgham, and N.A. Fangue.  Sensitivities of an endemic, endangered California smelt and two non-native fishes to serial increases in temperature and salinity: Implications for shifting community structure with climate change.  Conservation Physiology, 7(1), coy076.

 

Bennett, W.A., J.S. Rohrer, N.N. Kadir, N.A. Fangue, and T.F. Dabruzzi.  2018. Effects of respiratory media, temperature, and species on metabolic rates of two sympatric periophthalmid mudskippers.  Micronesica 5: 1-12.

 

Rodgers, E., A.E. Todgham, R.E. Connon, and N.A. Fangue.  2018. Stressor interactions in freshwater habitats: effects of cold water exposure and food limitation on easy-life growth and upper thermal tolerance in white sturgeon, Acipenser transmontanus.  Freshwater Biology, DOI: 10.1111/fwb.13224

 

Del Rio, A.M., B.E. Davis, N.A. Fangue and A.E. Todgham.  2018. Combined effects of warming and hypoxia on early life stage Chinook salmon physiology and development.  Conservation Physiology, 7(1), coy078.

 

Poletto, J.B., B. Martin, E. Danner, S.E. Baird, D.E. Cocherell, N.Hamda, J.J. Cech Jr. and N.A. Fangue.  2018. Assessment of multiple stressors on the growth of larval green sturgeon (Acipenser medirostris): Implications for recruitment and management of early life history stages. J. Fish Biology, DOI: 10.1111/jfb.13805

 

Baird, S.E., A.E. Steel, D.E. Cocherell, J.J. Cech Jr., and N.A. Fangue.  2018. Native Chinook salmon, Oncorhynchus tshawytscha, and nonnative brook trout, Salvelinus fontinalis,prefer similar water temperatures,  J. Fish Biology, brief communication, DOI: 10.1111/jfb.13810

 

Rodgers, E.M., D.E.Cocherell, T.X. Nguyen, A.E. Todgham, and N.A. Fangue. 2018.  Plastic responses to diel thermal variation in juvenile green sturgeon, Acipenser medirostris.  Journal of Thermal Biology, 76(2018): 147-155.

 

Hansen, M.J., D.E. Cocherell, S.J. Cooke, P.H. Patrick, M. Sills and N.A. Fangue.  2018.  Behavioral guidance of Chinook salmon smolts: the variable effects of LED spectral wavelength and strobing frequency.  Conservation Physiology, 6(1): coy032; doc:10.1093/conphys/coy032

 

Jeffries, K.M., N.A. Fangue, and R.E. Connon.  2018.  Multiple sub-lethal thresholds for cellular responses to thermal stressors in an estuarine fish.  Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 225: 33-45.

 

Davis, B.E., L.M. Komoroske, M.J. Hansen, J.B. Poletto, E.N. Perry, N.A. Miller, S.M. Ehlman, S.G. Wheeler, A. Sih, A.E. Todgham, and N.A. Fangue.  (2018).  Juvenile rockfish show resilience to CO2-acidification and hypoxia across multiple biological scales.  Conservation Physiology, doi.org/10.1093/conphys/coy038

 

Davis, B.E., E.E. Flynn, N.A. Miller, F.Nelson, N.A. Fangue, and A.E. Todgham.  2017. Antarctic emerald rockcod have the capacity to compensate for warming when uncoupled from CO2-acidification. Global Change Biology, DOI: 10.1111/gcb.13987
Connon, R.E., K.M. Jeffries, L.M. Komoroske, A.E. Todgham and N.A. Fangue.  2018. The utility of transcriptomics in fish conservation.  Journal of Experimental Biology, doi:10.1242/jeb.148833

 

Poletto, J.B., D.E. Cocherell, N. Ho, J.J. Cech Jr., A.P. Klimley, and N.A. Fangue.  2017. The effect of size on juvenile green sturgeon (Acipenser medirostris) behavior near water-diversion fish screens. Environmental Biology of Fishes, doi.org/10.1007/s10641-017-0681-3

 

Hobbs, J., P.M. Moyle, N.A. Fangue, and  R.C. Connon.  Is extinction inevitable for Delta Smelt and Longfin Smelt?  An Opinion and Recommendations for Recovery.  San Francisco Estuary and Watershed Science, in press.

 

Hammock, B.G., S.B. Slater, R. Baxter, N.A. Fangue, D.E. Cocherell, A. Hennessy, T. Kurobe, C.Y. Tai, and S.J. Teh.  Foraging and metabolic consequences of semi-anadromy for an endangered estuarine fish.  PlosOne, in press.

 

Frank, D.F., M. Hasenbein, K. Eder, K.M. Jeffries, J. Geist, N.A. Fangue, and R.E. Connon.  Transcriptomic screening of the innate immune response in delta smelt during an Ichthyophthirius multifiliis infection.  Aquaculture, in press.

 

Dabruzzi, T., W.A. Bennett, and N.A. Fangue.  Thermal ecology of the red lionfish, Pterois volitans, from southeast Sulawesi, Indonesia, with comparisons to other Scorpaenidea.  Aquatic Biology, in press.

 

Poletto, J.B., D.E. Cocherell, S.E. Baird, T.X. Nguyen, V. Cabrera-Stagno, A.P. Farrell, and N.A. Fangue.  Unusual aerobic performance at high temperatures in juvenile Chinook salmon, Oncorhynchus tshawytscha.  Conservation Physiology, in press.

 

Ercan, A., M.L. Kavvas, K. Carr, Z. Hockett, H. Bandeh, T.D. Mussen, D.E. Cocherell, J.B.Poletto, J. J Cech Jr., and N.A. Fangue.  Hydraulics near unscreened diversion pipes in open channels: large flume experiments.  Journal of the American Water Resources Association, in press.

 

Verhille, C.E., K.K. English, D.E. Cocherell, A.P. Farrell, and N.A. Fangue. High thermal tolerance of a rainbow trout population near its southern range limit suggests local thermal adjustment.  Conservation Physiology, in press.

 

Cole, B.J., S.M. Brander, K.M. Jeffries, S. Hasenbein, G. He, M.S. Denison, N.A. Fangue, and R.E. Connon.  (2016). Changes in Menidia beryllina gene expression and in vitro hormone-receptor activation after exposure to estuarine waters near treated wastewater outfalls.  Arch Environ Contam Toxic, doi: 10.1007/s00244-0282-8

 

Lee, S., S.S.O. Hung, N.A. Fangue, L. Haller, C.E.Verhille, J. Zhao, and A.E. Todgham.  (2016).  Effects of feed restriction on the upper temperature tolerance and heat shock response in juvenile green and white sturgeon.  Comparative Biochemistry and Physiology Part A, in press.

 

Komoroske, L.M, Jeffries, K.M., R.E. Connon, J. Dexter, M. Hasenbein, C. Verhille, and N.A. Fangue.  (2016).  Sublethal salinity stress contributes to habitat limitation in an endangered estuarine fish.  Evolutionary Applications, in press.

 

Jeffries, K.M., R.E. Connon, B.E. Davis, L.M. Komoroske, M.T. Britton, T. Sommer, A.E. Todgham, and N.A. Fangue.  (2016).  Effects of high temperatures on threatened estuarine fishes during periods of extreme drought.  Journal of Experimental Biology, in press.

 

Dabruzzi, T., M.A. Sutton, N.A. Fangue, and W.A. Bennett.  (2016).  Evidence for control of cutaneous oxygen uptake in the yellow-lipped sea krait Laticauda colubrina (Schneider, 1799).  Journal of Herpetology, in press.

 

Brander, S.M., K.M. Jeffries, B.J. Cole, B.M. DeCourten, J.W. White, S. Hasenbein, N.A. Fangue, and R.E. Connon.  (2016).  Transcriptomic changes underlie altered egg protein production and reduced fecundity in an estuarine model fish exposed to bifenthrin.  Aquatic Toxicology, in press.

 

Brennan, R.S. R. Hwang, M. Tse, N.A. Fangue, and A. Whitehead.  (2016).  Local adaptation to osmotic environment in killifish, Fundulus heteroclitus, is supported by divergence in swimming performance but not by differences in excess post-exercise oxygen consumption or aerobic scope.  Comparative Biochemistry and Physiology, Part A, in press.

 

Hasenbein, M., N.A. Fangue, J. Geist, L.M. Komoroske, J. Truong, R. McPherson and R.E. Connon.  (2016). Assessments at multiple levels of biological organization allow for an integrative determination of physiological tolerances to turbidity in an endangered fish species.  Conservation Physiology, in press.

 

Brown, L., L. Komoroske, W. Wagner, T. Morgan-King, J. May, R.E. Connon, and N.A. Fangue.  (2016). Coupled downscaled climate models and ecophysiological metrics forecast habitat compression for an endangered estuarine fish.  Plos One, 11(1): e0146724. doi:10.1371/journal.pone.0146724

 

Verhille, C.E., T.F. Dabruzzi, D.E. Cocherell, B. Mahardja, F. Feyrer, T. Foin, M.R. Baerwald, and N.A. Fangue.  (2016). Inter-population differences in salinity tolerance and osmoregulation of juvenile wild and hatchery-born Sacramento Splittail.  Conservation Physiology, 4 (1): cov063. doi: 10.1093/conphys/cov063

 

Klimley, A.P. et al.  Sturgeon in the Sacramento-San Joaquin Watershed: New insights to support conservation and Management.  San Francisco Estuary and Watershed Science, in press.

 

Verhille, C.D., S. Lee, A.E. Todgham, D.E. Cocherell, S.S.O. Hung, and N.A. Fangue.  Effects of nutritional deprivation on juvenile green sturgeon growth and therml tolerance.  Environmental Biology of Fishes, doi: 10.1007/s10641-015-0463-8

 

Hasenbein, M., N.A. Fangue, J. Geist, L.M. Komoroske, and R.E. Connon.  (2016).  Physiological stress biomarkers reveal stocking density effects in later larval Delta Smelt (Hypomesus transpacificus).  Aquaculture, 450: 108-115.

 

Komoroske, L.M., R.E. Connon, K.M. Jeffries, and N.A. Fangue.  Linking transcriptional responses to organismal tolerance reveals mechanisms of thermal sensitivity in a mesothermal endangered fish.  Molecular Ecology, 24, 4960-4981. doi: 10.1111/mec.13373

 

Poletto, J.B., D.E. Cocherell, T.D. Mussen, A. Ercan, H. Bandeh, M.L. Kavvas, J.J. Cech Jr., and N.A. Fangue.  (2015). Fish protection devices at unscreened water diversions can reduce entrainment: Evidence from behavioral laboratory investigations.  Conservation Physiology, 3:doi:10.1093/conphys/cov040.

 

Lee, S., Fadel, J.G., Haller, L.Y., Verhille, C.E., Fangue, N.A., and S.S.O. Hung.  (2015). Effects of Feed Restriction on Salinity Tolerance in White Sturgeon (Acipenser transmontanus).  Comparative Biochemistry and Physiology, Part A, 188: 156-167.

 

Mussen, T.D., Cocherell, D., Patton, O., Jauregui, D., Ercan, A., Bandeh, H., Meier, D., Thomas, S., Kavvas, M.L., Cech, Jr., J.J., and N.A. Fangue. (2015). Modified water-diversion structures can behaviorally deter juvenile Chinook Salmon from entrainment.  Transactions of the American Fisheries Society, DOI: 10.1080/00028487.2015.1064476.

 

Poletto, J.B., Cocherell, D.E., Mussen, T.D., Ercan, A., Bandeh, H., Kavvas, M.L., Cech, J.J. Jr., and Fangue, N.A.  (2014). Efficacy of a sensory deterrent and pipe modifications in decreasing entrainment of juvenile green sturgeon (Acipenser medirostris) at unscreened water diversions. Conservation Physiology 2, doi:10.1093/conphys/cou056.

 

Haller, L.Y., S.S.O. Hung, S. Lee, J.G. Fadel, J. Lee, M. McEnroe, and N.A. Fangue. (2015). The effect of nutritional status on the osmoregulation of green sturgeon (Acipenser medirostris). Physiological and Biochemical Zoology, 88(1): 22-42.  DOI: 10.1086/679519.

 

Vaz, P.G., Kebreab, E., S.S.O. Hung, J.G. Fadel, S. Lee, and N.A. Fangue.  (2015). Inpact of nutrition and salinity changes on biological performances of green and white sturgeon.  PlosOne, DOI: 10.1371/journal.pone.0122029.

 

Tomalty, K.M.H., Meek, M.H., Stephens, M.R., Roncon, G., Fangue, N.A., May, B.P., and M.R. Baerwald.  (2015). Transcriptional response to acute thermal exposure in juvenile Chinook salmon determined by RNAseq.  G3: Genes/Genome/Genetics, DOI:10.1534/g3.115.017699.

 

Jeffries, K., Komoroske, L.M., Truong, J., Werner, I., Hasenbein, M., Fangue, N.A., and R.E. Connon. (2015).  The transcriptome-wide effects of exposure to a pyrethroid pesticide on the critically endangered delta smelt (Hypomesus transpacificus).  Endangered Species Research, 28: 43-60.  DOI: 10.3354/esr00679.

 

Jeffries, K.M, Brander, S.M., Britton, M.T., Fangue, N.A., and Connon, R.E.  (2015). Chronic exposures to low and high concentrations of ibuprofen elicit different gene response patterns in a euryhaline fish.  Environmental Science and Pollution Research, DOI: 10.1007/s11356-015-4227-y.

 

Lee, S., L.Y. Haller, N.A. Fangue, J.G. Fadel, S.S.O. Hung. (2015). Effects of feeding rate on growth performance and nutrient partitioning of young-of-the-year white sturgeon (Acipenser transmontanus).  Aquaculture Nutrition, DOI: 10.1111/anu.12255.

 

Mahardja, B., B.P May, F. Feyrer, R. Coalter, N.A. Fangue, T. Foin, and M.R. Baerwald. (2014). Interannual variation in connectivity and comparison of contemporary effective population size between two populations of Splittail (Pogonichthys macrolepidotus) in the San Francisco Estuary. Conservation Genetics, DOI: 10.1007/s10592-014-0665-1.

 

Fangue, N.A., M.A. Wunderly, T.F. Dabruzzi, and W.A. Bennett. (2014). Asymmetric Thermal Acclimation Responses Allow Sheepshead Minnow, Cyprinodon variegatus, to Cope with Rapidly Changing Temperatures. Physiological and Biochemical Zoology, 87(6): 805-816. DOI: 10.1086/678965.

 

Wang, G., E. Yang, K.J. Smith, Y. Zeng, G. Ji, R. Connon, N.A. Fangue, and J.J. Cai. (2014). Gene expression responses of threespine stickleback to salinity: implications for salt-sensitive hypertension. Frontiers in Genetics, 5(312): 1-10. DOI: 10.3389/fgene.2014.00312.

 

Verhille, C.E., J.B. Poletto, D.E. Cocherell, B. DeCourten, S. Baird, J.J. Cech Jr., and N.A. Fangue. (2014). Larval green and white sturgeon swimming performance in relation to water diversion flowsConservation Physiology 2: doi:10.1093/conphys/cou031.

 

Lee, S., Y. Wang, S.S. Hung, A.B. Strathe, N.A. Fangue and J.G. Fadel. (2014). Development of Optimum Feeding Rate Model for White Sturgeon (Acipenser transmontanus).  Aquaculture 433:411–420.

 

Fangue, N.A., D.E. Cocherell, F. LaLuz, J.J. Cech, Jr, and L.C. Thompson. (2015). Juvenile and Adult Hardhead Mylopharodon conocephalus Oxygen Consumption Rates: Effects of Temperature and Swimming Velocity.  Environmental Biology of Fishes. DOI: 10.1007/s10641-014-0292-1.

 

Mussen, T.D., Patton, O., Cocherell, D., Ercan, A., Bandeh, H., Kavvas, M.L., Cech, J.J. Jr., and N.A. Fangue.  (2014). Can behavioral fish-guidance devices protect juvenile Chinook salmon, Oncorhynchus tshawytscha,from entrainment into unscreened water-diversion pipes?  Canadian Journal of Fisheries and Aquatic Sciences, 71(8): 1209-1219. DOI: 10.1139/cjfas-2013-0601.

 

Poletto, J.B.Cocherell, D.E., Ho, N., Cech, J.J. Jr., Klimley, A.P., and N.A. Fangue. (2014). Juvenile green sturgeon (Acipenser medirostris) and white sturgeon (Acipenser transmontanus) behavior near water-diversion fish screens: experiments in a laboratory swimming flumeCanadian Journal of Fisheries and Aquatic Sciences, 71: 1030-1038. DOI: 10.1139/cjfas-2013-0556

 

Komoroske L.M., R.E. Connon, J. Lindberg, B.S. Cheng, G. Castillo, M. Hasenbein and N.A. Fangue. (2014). Ontogeny influences sensitivity to climate change stressors in an endangered fishConservation Physiology 2: cou008-cou008.

 

Mussen, T.D., D. Cocherell, J.B. Poletto, J.S. Reardon, Z. Hockett, A. Ercan, H. Bandeh, M.L. Kavvas, J.J. Cech, Jr., and N.A. Fangue (2014). Unscreened Water-diversion Pipes Pose an Entrainment Risk to the Threatened Green Sturgeon, Acipenser medirostris. PLoS ONE 9(1): e86321. DOI: 10.1371/journal.pone.0086321

 

Miller, E.A., H.E. Froehlich, D.E. Cocherell, M.J. Thomas, J.J. Cech, Jr., A.P. Klimley, and N.A. Fangue (2014). Effects of Acoustic Tagging on Juvenile Green Sturgeon Incision Healing, Swimming Performance, and Growth. Environmental Biology of Fishes 97(6): 647-658.

 

Hasenbein, M., I. Werner, L.A. Deanovic, J. Geist, E.B. Fritsch, A. Javidmehr, C. Foe, N.A. Fangue, R.E. Connon (2014). Transcriptomic profiling permits the identification of pollutant sources and effects in ambient water samples. Science of the Total Environment 468-469: 688-698.

 

Gardell, A.M., J. Yang, R. Sacchi, N.A. Fangue, B.D. Hammock, and D. Kïueltz (2013). Tilapia (Oreochromis mossambicus) brain cells respond to hyperosmotic challenge by inducing myo-inositol biosynthesis. Journal of Experimental Biology. 216: 4615-4625.

 

Cocherell, D.E., N.A. Fangue, P.A. Klimley, and J.J. Cech, Jr (2013). Temperature Preferences of Hardhead Mylopharodon conocephalus and Rainbow Trout Oncorhynchus mykiss, in an Annular Chamber. Environmental Biology of Fishes. Published online 10 Ocober 2013, DOI 10.1007/s10641-013-0185-8.

 

Hasenbein, M., L.M. Komoroske, R.E. Connon, J. Geist, and N.A. Fangue (2013). Turbidity and Salinity Affect Feeding Performance and Physiological Stress in the Endangered Delta Smelt. Integrative and Comparative Biology 53 (4): 620-634.

 

Kaufman, R.C., R. Coalter, N.L. Nordman, D. Cocherell, J.J. Cech, Jr., L.C. Thompson, and N.A. Fangue (2013). Effects of temperature on hardhead minnow (Mylopharodon conocephalus) blood-oxygen equilibria. Environmental Biology of Fishes DOI: 10.1007/s10641-013-0116-8.

 

Poletto, J.B., D.E. Cocherell, A.P. Klimley, J.J. Cech, Jr., and N.A. Fangue (2013).Behavioural salinity preferences of juvenile green sturgeon Acipenser medirostrisacclimated to fresh water and full-strength saltwaterJournal of Fish Biology, 82: 671–685.

 

Mussen, T.D., D. Cocherell, Z. Hockett, A. Ercan, H. Bandeh, M.L. Kavvas, J.J. Cech, Jr., and N.A. Fangue (2013). Assessing Juvenile Chinook Salmon Behavior and Entrainment Risk near Unscreened Water Diversions: Large Flume SimulationsTransactions of the American Fisheries Society 142(1): 130-142.

 

Dabruzzi, T.F., W.A. Bennett, J.L. Rummer, and N.A. Fangue (2012). Juvenile Ribbontail Stingray, Taeniura lymma (Forsskål, 1775) (Chondrichthyes, Dasyatidae), demonstrate a unique suite of physiological adaptations to survive hyperthermic nursery conditions. Hydrobiologia DOI 10.1007/s10750-012-1249-z.

 

Schulte, P.M., T.M. Healy, and N.A. Fangue (2011). Thermal performance curves, phenotypic plasticity, and the time scales of temperature exposure. Integrative and Comparative Biology 51(5): 691-702.

 

Fangue N.A. , E.J. Osborne, A.E. Todgham, and P.M. Schulte (2011). The Onset Temperature of the Heat-Shock Response and Whole- Organism Thermal Tolerance Are Tightly Correlated in both Laboratory-Acclimated and Field-Acclimatized Tidepool Sculpins (Oligocottus maculosus). Physiological and Biochemical Zoology 84(4): 341-352.

 

Fangue N.A., M.J. O’Donnell, M.A. Sewell, P.G. Matson, A.C. MacPherson, and G.E. Hofmann (2010). A laboratory-based, experimental system for the study of ocean acidification effects on marine invertebrate larvae. Limnology and Oceanography: Methods8: 441–452.

 

O’Donnell M.J., A.E. Todgham, M.A. Sewell, L.M. Hammond, K. Ruggiero, N.A. Fangue, M.L. Zippay, and G.E. Hofmann (2010). Ocean acidification alters skeletogenesis and gene expression in larval sea urchinsMarine Ecology Progress Series 398: 157–171.

 

Fangue N.A., J.E. Podrabsky, L.I. Crawshaw and P.M. Schulte (2009). Countergradient Variation in Temperature Preference in Populations of Killifish Fundulus heteroclitus. Physiological and Biochemical Zoology 82(6): 776–786.

 

Rummer J.L., N.A. Fangue, H.L. Jordan, B.N. Tiffany, K.J. Blansit, S. Galleher, A. Kirkpatrick, A.A. Kizlauskas, C.M. Pomory, and W.A. Bennett (2009). Physiological tolerance to hyperthermia and hypoxia and effects on species richness and distribution of rockpool fishes of Loggerhead Key, Dry Tortugas National Park. Journal of Experimental Marine Biology and Ecology 371: 155–162.

 

Fangue N.A., J.G. Richards and P.M. Schulte (2009). Do mitochondrial properties explain intraspecific variation in thermal tolerance? The Journal of Experimental Biology 212: 514-522.

 

Fangue N.A., M. Mandic, J.G. Richards and P.M. Schulte (2008). Swimming Performance and Energetics as a Function of Temperature in Killifish Fundulus heteroclitus. Physiological and Biochemical Zoology 81(4): 389–401.

 

Sloman K.A., M. Mandic, A.E. Todgham, N.A. Fangue, P. Subrt, and J.G. Richards (2008).The response of the tidepool sculpin, Oligocottus maculosus, to hypoxia in laboratory, mesocosm and field environments. Comparative Biochemistry and Physiology, Part A 149: 284–292.

 

Fangue N.A., M. Hofmeister and P.M. Schulte (2006). Intraspecific variation in thermal tolerance and heat shock protein gene expression in common killifish, Fundulus heteroclitus. The Journal of Experimental Biology 209: 2859-2872.

 

Tiffany B.N., N.A. Fangue and W.A. Bennett (2006). Disappearance of a population of pygmy octopus following a harmful algal bloom in a northwestern Florida bay, U.S.A.American Malacological Bulletin 21: 11-15.

 

Fangue N.A. and W.A. Bennett (2003). Thermal Tolerance Responses of Laboratory-Acclimated and Seasonally Acclimatized Atlantic Stingray, Dasyatis Sabina. Copeia 2003(2): 315-325.

 

Fangue N.A., K.E. Flaherty, J.L. Rummer, G. Cole, K.S. Hansen, R. Hinote, B.L. Noel, H. Wallman, and W.A. Bennett (2001). Temperature and Hypoxia Tolerance of Selected Fishes from a Hyperthermal Rockpool in the Dry Tortugas, with Notes on Diversity and Behavior.Carribean Journal of Science 37(1-2): 81-87.